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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12741415 chr1:202474774 A/G TMSB4Y chrY:15815447-15817904:+ -0.48 -8.31 1.67E-15 Box Plot
BLCA rs12741415 chr1:202474774 A/G TTTY14 chrY:21034387-21239302:- -0.51 -8.12 6.39E-15 Box Plot
BLCA rs12741415 chr1:202474774 A/G TTTY15 chrY:14774265-14804162:+ -0.43 -7.5 4.59E-13 Box Plot
BLCA rs12741415 chr1:202474774 A/G USP9Y chrY:14813160-14972764:+ -0.46 -8.6 2.0E-16 Box Plot
BLCA rs12741415 chr1:202474774 A/G UTY chrY:15360259-15592553:- -0.43 -8.38 1.01E-15 Box Plot
BLCA rs12743158 chr1:188667802 C/A GPR149 chr3:154055461-154147504:- 0.43 6.12 2.34E-9 Box Plot
BLCA rs12753023 chr1:188665507 A/G GPR149 chr3:154055461-154147504:- 0.43 6.12 2.36E-9 Box Plot
BLCA rs12758150 chr1:188700069 C/T GPR149 chr3:154055461-154147504:- 0.42 6.02 4.13E-9 Box Plot
BLCA rs12758988 chr1:88296400 G/A GGT1 chr22:24979718-25024972:+ 0.72 6.27 9.53E-10 Box Plot
BLCA rs12773997 chr10:67843820 T/C KRT72 chr12:52979373-52995322:- -0.31 -6.02 4.12E-9 Box Plot
BLCA rs12777291 chr10:11680414 T/G REG3A chr2:79384129-79386879:- 0.38 6.16 1.85E-9 Box Plot
BLCA rs12782672 chr10:121763192 A/G PRRT4 chr7:127990379-128001739:- -0.64 -5.96 5.71E-9 Box Plot
BLCA rs12799701 chr11:77684136 C/T INTS4L1 chr7:64601603-64694600:+ 0.47 6.59 1.43E-10 Box Plot
BLCA rs12805869 chr11:19527554 G/A EFCAB2 chr1:245133007-245290466:+ -0.5 -6 4.7E-9 Box Plot
BLCA rs12806445 chr11:19527854 A/G EFCAB2 chr1:245133007-245290466:+ 0.49 6.1 2.55E-9 Box Plot